Volume 5, Number 4, Article 5, Pages 331-347 doi:10.1167/5.4.5 http://journalofvision.org/5/4/5/ ISSN 1534-7362
A cellular and molecular model of response kinetics and adaptation in primate cones and horizontal cells
Hans van Hateren
Department of Neurobiophysics, University of Groningen, Groningen, The Netherlands
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Abstract

A model for the sensitivity regulation in the primate outer retina is developed and validated using horizontal cell measurements from the literature. The main conclusion is that the phototransduction of the cones is the key factor regulating sensitivity. The model consists of a nonlinearity cascaded with three feedback control loops. The nonlinearity is caused by the hydrolysis of cGMP by activated phosphodiesterase. The first feedback loop is divisive, with calcium regulating the photocurrent in the cone outer segment. The second feedback loop is also divisive, with voltage-sensitive channels regulating the membrane voltage of the cone inner segment. The final feedback loop is subtractive, where the membrane voltage of the horizontal cell is subtracted from that of the cone before the cone drives the horizontal and bipolar cells. The model describes adequately the major characteristics of the horizontal cell responses to wide field, spectrally white stimuli. In particular, it shows (1) sensitivity and bandwidth control as a function of background intensity; (2) the major nonlinearities observed in the horizontal cells; and (3) the transition from linear responses toward contrast constancy (Weber's law) for background illuminances ranging from 1-1000 td.




History
Received October 31, 2004; published April 15, 2005
Citation
van Hateren, J. H. (2005). A cellular and molecular model of response kinetics and adaptation in primate cones and horizontal cells. Journal of Vision, 5(4):5, 331-347, http://journalofvision.org/5/4/5/, doi:10.1167/5.4.5.
Keywords
horizontal cells, macaque, cone, sensory transduction, light adaptation, computational model
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Introduction
The light intensity of visual stimuli varies enormously in natural environments. Visual systems generally cope with these variations by regulating sensitivity to light at an early stage of visual processing. In the visual system of the macaque, Smith, Pokorny, Lee, and Dacey (2001) showed that such a regulation could be measured at the level of the horizontal cells in the outer retina. These cells are directly postsynaptic to the cones. They are thought to provide feedback to the cone pedicles, and thus regulate the temporal, spatial, and spectral properties of the output of the cones to the bipolar cells.
A fully adequate model of sensitivity regulation in the outer retina is lacking, whereas it is clearly important for modeling visual processing upstream in the retina and beyond. It should necessarily form the first stage of any model of the visual system that could function well in natural, outdoor-lighting conditions. The present study, therefore, aims to develop such a model, using the extensive set of horizontal cell measurements recently published (Lee, Dacey, Smith, & Pokorny 2003; Smith et al., 2001). It will be shown that the sensitivity regulation observed in horizontal cells with wide field, spectrally white stimuli, is fully consistent with the regulation expected from the known processes of the phototransduction machinery of the cones.
Model
Both phototransduction and the neural circuit of cone and horizontal cell have been extensively investigated, and much is known about the physiological processes that determine their dynamics (for reviews of phototransduction, see Arshavsky, Lamb, & Pugh 2002; Burns & Baylor, 2001; Fain, Matthews, Cornwall, & Koutalos 2001; Pugh & Lamb, 2000; for a review of horizontal cells, see Kamermans & Spekreijse, 1999). Below I will represent a series of these processes, first as differential equations describing their dynamics, and subsequently as a system model consisting entirely of first-order low-pass filters and static nonlinearities. Because many readers may not be fully familiar with all of these fields, I will present the key topics in a relatively self-contained manner. The variables in the model have different physical dimensions, ranging from trolands through ion currents and concentrations to electrical currents and voltages. To keep the equations as concise as possible, I will not explicitly include dimensional conversion constants, and I will allow gains that are not dimensionless. Wherever the dimensions in an equation appear not to match, the reader should assume an implicit conversion constant of unit dimension.
Low-pass filters and static nonlinearities
In the sections below I will show that the (coupled) differential equations describing the system can be translated into a system model with only two types of components: first-order low-pass filters and static nonlinearities. The fact that the behavior of these components is straightforward and well understood greatly simplifies understanding and analysis of the system dynamics. I will therefore first introduce these basic components.
The standard equation describing a low-pass filter with time constant τy, transforming an input signal x(t) into an output signal y(t), is
eq1.gif(1)
with the dot denoting time differentiation:
eq2.gif(2)
Figure 1A shows how this filter is depicted in the models below. The solution of Equation 1 is
eq3.gif(3)
which is the convolution of the input function x(t) with the impulse response of the filter,
eq4.gif(4)
The low-frequency (DC-) gain of this filter equals 1, thus low frequencies are not changed by the filter.
fig01.gif
Figure 1. A. Representation of a first-order low-pass filter transforming x(t) into y(t), with time constant τy and DC-gain 1. B. A static nonlinear function f(x) transforms x into y for each t.
An alternative form of a low-pass filter that often occurs when dealing with chemical reactions and membrane processes is given by a variant of Equation 1:
eq5.gif.(5)
This equation is associated with an impulse response
eq6.gif.(6)
The low-frequency gain now equals τy. An example of such a process, where gain and time constant are covarying, is the voltage response to a current injected into a cell: When the membrane resistance is lowered, both the membrane time constant and the gain (voltage response to a given current) decrease. Below, such processes are described as the cascade of a separate gain τy and a standard low-pass filter as in Figure 1A.
The second component used in the models below is the static (memory-less) nonlinearity depicted in Figure 1B: It gives, for each point in time, the output y(t) as a function f(x(t)) of the input x(t). The function f(·) itself is not a function of time, only of the present value of its input x. A special case is the function f(x) = gx, with g a constant describing a (linear) gain.
Outer segment: Phosphodiesterase activation and cGMP hydrolysis
For the equations describing the phototransduction cascade I will keep the notation as short as possible by mostly using single letter symbols for the variables and constants involved. Furthermore, I will keep the number of variables, such as scaling constants, to a bare minimum, and include only those that affect the calculations when fitting to the measurements on horizontal cells. Cascaded scaling factors or gains will therefore be merged into a single factor or gain wherever possible. Many of the equations are based on modeling work by Calvert, Govardovskii, Arshavsky, and Makino (2002), Detwiler, Ramanathan, Sengupta, and Shraiman (2000), Hamer (2000), Koutalos and Yau (1996), Pugh and Lamb (2000), Schnapf, Nunn, Meister, and Baylor (1990), and in particular Nikonov, Engheta, and Pugh (1998), and Nikonov, Lamb, and Pugh (2000). These studies also give extensive references to the original experimental studies that have led to the understanding of the dynamics of the various parts of the system.
Figure 2A shows on the left the reaction scheme leading from the absorption of light (I) by the visual pigment (R) via a G-protein (G) to the production of activated phosphodiesterase (E*). In the first step, the visual pigment absorbs light, and is converted into an active form (R*). The active form is removed with a rate constant kR. It is assumed here that the light intensity is sufficiently low such that the concentration of R is not significantly affected (new R is produced fast enough, and there is no significant bleaching of the pigment). The reaction is then described by
eq7.gif,(7)
with I the retinal illuminance in trolands, and AR a scaling constant. This can be rewritten as
eq8.gif,(8)
which can be recognized as a low-pass filter with time constant τR and gain τRAR.
fig02.gif
Figure 2. A. Light I produces excited visual pigment R*, which produces excited G-protein G*, activating phosphodiesterase (PDE). The system diagram to the right describes only the associated low-pass filtering, whereas the gain of the reactions is incorporated into the constant kβ shown in B. B. Production of X (cGMP) under conditions of clamped calcium (i.e., fixed α). The differential equation describing production and removal of cGMP can be interpreted as shown in the system diagram on the right: a static nonlinearity 1/β followed by low-pass filtering with a time constant τX = 1/β.
In the second step, R* activates a G-protein into its active form, G*, which subsequently forms an active complex E* with phosphodiesterase (PDE). Although the latter reaction can be modeled as a separate low-pass filter, its time constant is assumed to be so short that it can be neglected (Lamb & Pugh, 1992). It is again assumed that light intensities are such that neither G nor PDE is significantly reduced. Therefore, the production of E* is described by
eq9.gif
eq10.gif,(9)
with kE the rate of E* inactivation. This is also a low-pass filter, with time constant τE and gain τEAE. For simplicity, this gain and the one in Equation 8 are merged into the gain, kβ, describing the activity of E* (see below). Equations 8 and 9 can therefore be represented by the system model on the right side of Figure 2A.
Figure 2B shows on the left the reaction scheme where E* reduces the concentration of cGMP (symbolized by X below), which is itself produced at a rate α. The activity of PDE, β, is described by a constant dark activity (here cβ, often called βdark in the literature) plus a term depending on the amount of activated PDE:
eq11.gif,(10)
with kβ a constant. The concentration of cGMP is then described by
eq12.gif.(11)
At first sight, this looks like a complicated nonlinear equation, because the input, β, is multiplied by the output, X. However, it is possible to reformulate this equation as a static nonlinearity followed by a first-order low-pass filter with variable time constant. This can be seen be rewriting Equation 11 as
eq13.gif(12)
In this equation, the input 1/β is low-pass filtered into an output X, with a time constant τX depending on the input, and a gain α. Assuming for the moment that the gain α is constant (it is in fact under calcium control; see below), Equations 10 and 12 can be represented by the system model on the right side of Figure 2B. The importance of 1/β for setting the sensitivity and time constant of the system has been discussed for rods (see Nikonov et al., 2000).
Outer segment: The calcium feedback loop
Figure 3 shows on the left the reaction scheme of the calcium feedback loop. An increase in cGMP concentration (X) will open more cyclic nucleotide-gated (CNG) ion channels in the plasma membrane of the outer segment, resulting in an inward current consisting partly of Ca2+. The resulting increase in calcium concentration is counteracted by a Na+/Ca2+–K+ exchanger, and possibly by calcium buffering. The increased calcium concentration reduces the rate with which guanylate cyclase (GC) synthesizes cGMP, and thus counteracts the initial rise of cGMP. In a secondary loop, more important in cones than in rods (Rebrik & Korenbrot, 2004), Ca2+ decreases the sensitivity of the CNG channels to cGMP.
fig03.gif
Figure 3. In the calcium control loop, an increase in cGMP (X) opens more membrane channels, increasing the photocurrent Ios and the calcium influx. The increase in calcium reduces, via guanylate cyclase (GC), the production of cGMP, counteracting the initial rise. In a secondary negative feedback loop, calcium reduces the effectiveness of the membrane channels (dashed lines).
The Ca2+ concentration, called C here, is described by
eq14.gif
eq15.gif,(13)
where η is a scaling constant describing which proportion of the total photocurrent, Ios, is carried by calcium, and kC is the removal rate of calcium, presumably due to the exchanger. Thus C is a low-pass filtered version of the photocurrent, with time constant τC and gain τCη. For the calculations, this gain will be merged into the scaling constant aC determining α, as described below.
The reaction scheme contains two nonlinearities due to cooperativity. The opening of the CNG channels depends on the cGMP concentration as
eq16.gif,(14)
with Ios the photocurrent into the outer segment, and nX typically 3 (Koutalos & Yau, 1996). Scaling is incorporated into the scaling constant aC below, and into the scaling constant ais determining the voltage response of the inner segment (see next section). The activity with which GC produces cGMP is, for the values of C relevant for the fits, described by
eq17.gif(15)
with aC a scaling constant, and nC typically taken to be 2 (Koutalos & Yau, 1996). The numerator of Equation 15 is scaled to 1 without loss of generality, because all scaling needed for the model fits is incorporated into the scaling constants aC and ais.
Equations 12-15 are represented by the system model on the right side of Figure 3. To emphasize that it is a negative feedback loop and to enable an easy comparison with existing models, it is drawn as a divisive gain control: The input Q (=1/β) is divided by 1/α, which is itself an expansive function of the calcium concentration, and therefore provides strong negative feedback. The broken line in the Figure represents the reduction of the channel sensitivity caused by calcium: either through the calcium concentration C or, possibly more accurately, through the calcium current if the interactions are restricted to local domains. To keep the model as simple as possible, I am not modeling this interaction in detail. Instead, I assume it accounts for the fact that the standard value nX =3 cannot produce acceptable fits of the model to the measurements. It produces major deficiencies in the sensitivities as a function of contrast and mean intensity. Leaving nX as a free parameter in the fits leads to much lower values, typically nX =1. This low value of nX may be the result of the direct calcium feedback onto the CNG channels: Channel openings caused by an increase in X are counteracted by the subsequent increase in calcium influx. It is well known in engineering that negative feedback loops can apparently linearize nonlinearities in the forward path. For example, a fast divisive feedback loop with a squaring operation in the feedback path will have output = input/output2, or output = input1/3, thus converting an actual nX =3 into an apparent nX =1. I will assume the value nX =1 below.
Similarly, I found that the fits, although not unreasonable for values nC = 2 or 3, were significantly better for nC 4. An apparent value of nC = 4 was recently reported and discussed for rods (Burns, Mendez, Chen, & Baylor, 2002). I will assume nC =4 below.
Inner segment and cone pedicle
The inner segment contains a range of ion channels, partly voltage sensitive, shaping the response (Yagi & MacLeish, 1994). To model this without introducing many (poorly known) parameters, I will follow here the approach of Detwiler, Hodgkin, and McNaughton (1980). It is assumed that the overall steady-state conductance of the membrane, gis, is given by a (nonlinear) function of the receptor potential Vis:
eq18.gif,(16)
where Vis is defined relative to the resting potential (i.e., the potential when Ios = 0). The voltage response to an abrupt change in Ios is given by the instantaneous conductance of the membrane, gi, thus
eq19.gif(17)
Finally, it is assumed that the instantaneous conductance approaches the steady-state conductance according to first-order kinetics:
eq20.gif.(18)
The precise form of gis(Vis) is not known for primate cones, but I found that those aspects of horizontal cell responses that are presumably generated at the inner segment (in particular, response sagging, rebounds after pulses and steps, and reduced sensitivity at low frequencies) are well modeled by assuming
eq21.gif,(19)
where ais is a scaling constant, and eq22.gif is a constant that is approximately 0.7 according to the fits below.
The change of Vis in response to a change in Ios is in reality not as instantaneous as suggested by Equation 17, because the membrane capacitance has to be charged. This can be represented by an additional low-pass filter with time constant τm, assumed to be approximately constant. The gain of this filter is merged into the scaling constant ais. The above equations lead to the system model shown in Figure 4. Although the signal transfer from the cone inner segment to the cone pedicle may produce some additional filtering (Hsu, Tsukamoto, Smith, & Sterling, 1998), it is assumed here that the signal arriving at the cone pedicle is that of the inner segment. An alternative interpretation is that any additional filtering can be thought to be incorporated into the parameters γ, ais, τis, and τm used here for the model of the inner segment.
fig04.gif
Figure 4. Model of the filtering properties of the inner segment.
The cone-horizontal cell feedback loop
For the feedback from the horizontal cell to the cone pedicle, I assume the subtractive scheme shown in Figure 5A. This is consistent with recent proposals for the feedback mechanism (Kamermans, Fahrenfort, Schultz, Janssen-Bienhold, Sjoerdsma, et al., 2001), and also with the spatially local character of the gain control (see Discussion). The driving force Vs for transmitter release It is determined by the difference of the voltage of the inner segment, Vis, and the voltage Vh of the horizontal cell multiplied by a gain gh. Thus
eq23.gif.(20)
In the calculations below, gh is fixed to 1, because it can be merged with the forward gain gs. Going around the loop there are three low-pass filters, which together with the gain gs determine the characteristics of the resonant oscillations observed in horizontal cells. The minimum number of low-pass filters required to obtain oscillations is two, but I found that the shape of the resonance peak and the associated oscillations is better described with three filters than with two or more than three. Although the filters can be arranged in any order, I tentatively consider the filters with relatively short time constants, τ1 and τ2, as being involved in the processes of transmitter release (e.g., related to the rate of presynaptic calcium extrusion; Morgans, El Far, Berntson, Wässle, & Taylor, 1998), synaptic diffusion (e.g., related to the rate of glutamate removal; Gaal, Roska, Picaud, Wu, Marc, et al., 1998), or postsynaptic transduction. The longer time constant τh may then be interpreted as the effective time constant of the horizontal cell. The properties of the feedback loop, in particular the total gain, will depend on the spatial properties of the stimulus with respect to the (broad) receptive field of the horizontal cell. Because the spatial extent of all stimuli used in the measurements considered in this article was kept constant (5° diameter), I assume a fixed total gain for each cell. The influence of the spatial layout of the stimulus will be considered in a forthcoming article.
fig05.gif
Figure 5. A. The cone-horizontal cell feedback circuit is basically linear (subtractive feedback), where the membrane potential of the horizontal cell, Vh, is subtracted from that of the cone, Vis. The generally small difference is amplified by a gain gs, which forces Vh to follow Vis closely at low frequencies. At intermediate frequencies, the low-pass filters in the loop produce a delay causing oscillations in the response. At high frequencies, the feedback ceases to function, and Vh is then a low-pass filtered version of Vis. B. Nonlinearities added to the loop of A. It(Vs) describes the synaptic activation; aI is a factor depending, through Vis, on the background illuminance.
Nonlinear synaptic gain and illuminance-dependent dynamics
The release of transmitter and its postsynaptic transduction are known to be nonlinear processes. The cone-horizontal cell feedback loop, possibly together with more local ionic feedback circuits, will tend to (apparently) linearize this process (Kraaij, Spekreijse, & Kamermans, 2000). The model as presented up to this point, with a linear gain gs, produces acceptable fits to all horizontal cell measurements considered below. There are two nonlinearities that improved the fits sufficiently to justify their inclusion into the model. For high-contrast steps at high illuminance, there is an indication of a transiently reduced gain gs (see Comparison with measurements, Figure 8). To model this, I included a nonlinearity similar to the one used by Kamermans, Kraaij, and Spekreijse (2001): The effective transmitter release as a function of Vs is, for the values of Vs relevant for the fits, described by a Boltzman function:
eq24.gif,(21)
with gt, Vk, and Vn constants. The more negative Vs becomes, the more the transmitter release will shut down. Because the stimuli considered in this article are spectrally white and have a broad spatial extent (5°), the modulation of Vs is generally small (e.g., see Figure 6B, panel 11). Therefore, the effect of the nonlinearity of Equation 21 is limited. This would be different, however, when the stimulus has a narrow spatial extent, resulting in a larger difference between the response of the excited cones and the horizontal cell, and thus in a larger modulation of Vs. Similarly, a non-white stimulus can increase the modulation of Vs as well. The nonlinearity of Equation 21 is then more important (Kamermans & Spekreijse, 1999).
fig06.gif
Figure 6. A. Full model, essentially consisting of a nonlinearity cascaded with two divisive feedback loops and a subtractive feedback loop. B. Response to a 100-ms step in illuminance. The panel numbers correspond to the processing stages marked in A. See the text for details.
A second nonlinearity becomes clear when inspecting the high-frequency oscillations seen in response to pulses (Figure 7). The frequency of these oscillations decreases with decreasing background intensity. This indicates that the time constants or gain of the feedback loop are intensity dependent. This also influences the high-frequency part of the curves giving the sensitivity as a function of illuminance and frequency (Figure 14). I found that the shift in oscillation frequency could be modeled by assuming that a single factor, aI, decreases the gain gt and increases the time constants τ2 (or, equivalently, τ1) and τh with decreasing intensity. The effective gain and time constants are then gt/aI, aIτ2, and aIτh. Decreasing intensity covaries with increasing Vis; Good fits were obtained by making aI depend on Vis, a low-pass filtered version of Vis, as
eq25.gif,(22)
with VI and μ constants, and Vis obtained by low-pass filtering Vis with a time constant τa of 250 ms. Similar results were obtained by assuming that aI depends on Vh rather than Vis. The changes in gain and time constants obtained from the fits were modest, typically 5-20% for 10-fold steps of the background intensity. Figure 5B shows the system model associated with both of the above nonlinearities.
fig07.gif
Figure 7. Black circles: data from Figures 4 and 5 of Smith et al. (2001), fitted by the model (continuous red lines). The dashed blue lines show the responses of the model using the generic parameter values (Table 1). The left column shows responses to 10-ms pulses (starting at t=0 ms; see black bars at time axes) of varying contrast (0.1, 1, 2, 4, 8, 16) at background illuminances of 100, 10, and 1 td. The right column shows this for 100-ms steps (starting at t=0 ms; see black bars at time axes). Traces are offset from 0 mV for the sake of clarity. Parameters of the fitted curves: τR = 0.49, τE = 16.8, cβ = 2.8·10-3, kβ = 1.63·10-4, τC = 2.89, aC = 9.08·10-2, γ = 0.678, τis = 56.9, ais = 7.09·10-2, gt = 151.1, VI = 19.7, and μ = 0.733; for dimensions of the parameters, see Table 1. Parameters not mentioned are set at the generic values given in Table 1 (as they are for the figures below). Note that the order of the parameter values of τR and τE is arbitrary; the shortest of the values will always be arbitrarily assigned to τR below.
fig08.gif
Figure 8. Effect of using a linear (dashed green line) or nonlinear (continuous red line) synaptic gain for a 100-ms step of contrast 16 at 100 td (i.e., a step from 100 to 1700 td; step starts at t = 0 ms; see black bar at time axis). Parameters for the nonlinear case are identical to those of Figure 7; for the linear case gs = 8.81, with other parameters identical to those of Figure 7.
Example of model performance
The model is shown in its complete form in Figure 6A. Figure 6B shows how a simple stimulus, a 100-ms step of contrast 2 at a background illuminance of 100 td, is transformed by the subsequent processing steps in the model, using the parameters fitted to Figure 7 below. The encircled numbers in the panels correspond to the numbers in Figure 6A. The intensity step is first low-pass filtered by τR and τE, yielding a signal proportional to the concentration of activated PDE (panel 2). The rate of cGMP hydrolysis, β, is elevated by cβ relative to the E* curve (Equation 10), hardly visible in the graph at these illuminances (panel 3). The inverse of β (panel 4) is the signal that acts as the input to the calcium feedback loop. It is regulated by 1/α (panel 8), a low-pass filtered version of the loop output. This signal is slightly delayed relative to 1/β because of the low-pass filtering, and therefore boosts high temporal frequencies (panel 5). Furthermore, the feedback effectively reduces the dynamic range needed by the signal (cf. panels 6 and 4). The feedback loop of the inner segment (panel 10) reduces low frequencies (panel 9). In panel 9 the membrane voltage of the cone is shown relative to its membrane potential in the dark (i.e., Vis-Vis,dark). Similarly, panel 14 shows the membrane voltage of the horizontal cell relative to its dark value (i.e., Vh-Vh,dark). It should be noted that the scaling of Vis relative to Vh is not fully determined by the measurements on Vh considered here, because it depends on fixing gh = 1 in Equation 20. In the cone-horizontal cell feedback loop (panels 11-14), the membrane potential of the horizontal cell is subtracted from that of the cone. The resulting Vs = Vis-Vh is small, only in the order of a mV. It is transient, because the signal in the horizontal cell is delayed, due to the low-pass filtering, relative to that in the cone. The resulting oscillations (panels 11, 12) arrive, however, strongly attenuated in the horizontal cell (panel 14). Note that the signal presumably going to the bipolar cells (bc in Figure 6A) is considerably more transient (panel 13) than that of the horizontal cell. How much of this shows up in the bipolar cells depends on the amount of low-pass filtering and further processing occurring in the bipolar cells.
Model implementation
I implemented the model as a series of auto-regressive moving average (ARMA) filters (e.g., Fante, 1988; also see below). A Fortran90 code producing the example of Figure 6B can be obtained by clicking here (Supplementary material). I verified the correctness of the model implementation by comparing its responses to small signals with the transfer function obtained from a small-signal analysis of the model (see Supplementary material), and by comparing its responses to large signals with a fourth-order Runge-Kutta solution of the system of differential equations involved. The implementation using ARMA filters is advantageous because it is both highly accurate and very fast, and therefore allows extensive fitting of the model to the horizontal cell data. The fitting was performed using a simplex algorithm (Press, Teukolsky, Vetterling, & Flannery, 1992) for minimizing the RMS-deviation between model responses and measurements. When responses with very different amplitudes rmax were used for simultaneous fitting, the RMS-deviations were scaled by eq26.gif to prevent the largest responses to completely dominate the fit. This was a pragmatic choice that still assigns more weight to large responses because they are less affected by noise and provide more information on the nonlinearities in the model. The measured data from horizontal cells in Figures 7-14 were obtained from the graphs in the on-line versions of Smith et al. (2001) and Lee et al. (2003), using specialized software (g3data).
For a first-order low-pass filter with time constant τ, the output y(n) to an input x(n), with a time step Δt, is given by the following ARMA filter (Brown, 2000):
eq27.gif(23)
with
eq28.gif(24)
In the calculations I used Δt = 100 μs; with this time step, the model computes approximately 100 times faster than the real cone (3 GHz PC, Intel Fortran compiler on Linux). I verified that results were indistinguishable from those obtained with time steps of 10 μs or 200 μs. For time steps significantly longer than 200 μs, the implicit extra delay of one time step in the high-gain feedback loops of Figure 6A leads to spurious oscillations.
Comparison with measurements
Below I present fits of the model to a range of measurements on macaque H1 horizontal cells, as published in Lee et al. (2003) and Smith et al. (2001). The behavior of the model is complex, due to the nonlinearities and feedback loops, and the model contains many parameters. There is always the possibility, therefore, that good fits are obtained by overfitting (i.e., with very different, nonphysiological parameter values for different stimuli or different cells). To show that this is not a significant problem here, I determined a set of typical parameter values (listed in Table 1), which together determine a "generic model" producing generic responses. For most measurements presented below (black symbols), I will show two model calculations: the generic response (dashed blue line) and the fitted response (continuous red line). I often fitted with only a subset of parameters left free, fixing the others because which parameters are relevant depends on the type of stimulus. For example, the parameters determining the behavior of the model for large changes of background intensity should not be left free to vary for a medium contrast stimulus at one particular background intensity. Details on the fitted parameters and their values are given in the Figure captions and in Table 1.

Symbol
Description
Units
Generic value
Range
τR
time constant of R* inactivation
ms
3.4
0.5 - 6.5
τE
time constant of E* inactivation
ms
8.7
3.0 - 16.8
cβ
rate constant of cGMP hydrolysis in darkness
(ms)-1
2.8·10-3
2.0·10-3 - 4·10-3
kβ
rate constant of cGMP hydrolysis
(ms)-1/td
1.6·10-4
4.9·10-5 - 3.9·10-4
β
cGMP hydrolysis rate
(ms)-1
-
-
τX
time constant of cGMP turnover
ms
-
-
X
scaled cGMP concentration
au
-
-
nX
apparent Hill coefficient of CNG activation
-
1
fixed
Ios
scaled photocurrent of outer segment
au
-
-
τC
time constant of Ca2+ extrusion
ms
3
2 - 6.3
C
scaled Ca2+ concentration
au
-
-
aC
scaling constant of GC activation
au
9·10-2
3.5·10-2 - 2.1·10-1
nC
apparent Hill coefficient of GC activation
-
4
fixed
α
GC activity
au
-
-
τm
capacitive membrane time constant
ms
4
fixed
Vis
membrane voltage of inner segment
mV
-
-
γ
parameter of membrane nonlinearity
-
0.7
0.49 - 0.73
ais
scaling constant of membrane nonlinearity
au
7·10-2
1.9·10-2 - 1.7·10-1
τis
time constant of membrane nonlinearity
ms
90
23 - 139
Vs
effective membrane voltage of cone pedicle after subtractive feedback
mV
-
-
gt
parameter of transmitter activation curve
au
125
71 - 185
Vk
parameter of transmitter activation curve
mV
-10
fixed
Vn
parameter of transmitter activation curve
mV
3
fixed
It
transmitter activation
au
-
-
VI
parameter of gain factor aI
mV
20
20 - 50
μ
parameter of gain factor aI
-
0.7
0.17 - 0.73
τa
time constant for gain factor aI
ms
250
fixed
aI
gain factor
-
-
-
τ1
time constant of cone - horizontal cell loop
ms
4
fixed
τ2
time constant of cone - horizontal cell loop
ms
4
2.5 - 4
τh
time constant of cone - horizontal cell loop
ms
20
20 - 35
Vh
membrane voltage of horizontal cell
mV
-
-
Table 1. Parameters and variables used in the model; see Figure 6 and Equations 7-22. Generic values are used for calculating the generic curves in the figures. The range shows the minimum and maximum values obtained from all fits presented here. Notes: the smallest of the values at τR and τE is arbitrarily assigned to τR; generic values of τX (=1/(cβ+kβI), with I in td) are 340, 230, 53, and 6.1 ms for illuminances of 1, 10, 100, and 1000 td, respectively. au = arbitrary unit.
Because the properties of horizontal cells, such as their sensitivity, vary, the generic response will generally deviate from the measurements. But as will become clear below, the generic responses always capture the basic qualifying characteristics of the measured responses.
Apart from the parameters of the model of Figure 6A, there is one additional parameter that I used as a free parameter in the fits where applicable, namely an overall delay. This accounts for any delay not incorporated into the model (such as transmission and diffusion times and possibly instrumental delay). The delay was forced to be identical for the responses to all stimulus conditions used for a particular cell. It was always small, typically around 3 ms.
The light intensities in this study are expressed in units of trolands (td). This is a measure of retinal illuminance, defined as the area, in mm2, of the pupil of the eye times the scene luminance, expressed in candela/m2. At a luminance of 100 cd/m2, the pupil has a diameter of approximately 3 mm, thus then 100 cd/m2 corresponds to 640 td. Such a luminance corresponds roughly to the mean luminance outdoors on a dull cloudy day, and is an order of magnitude higher than the typical mean luminance indoors.
Pulse and step responses
Figure 7 shows responses to 10-ms pulses and 100-ms steps, with various contrasts superimposed on 100-, 10-, and 1-td backgrounds. Note the nonlinearity of response size as a function of contrast and of background intensity. The model fits (continuous red lines) were made to all stimulus conditions simultaneously, and are generally good, considering the wide range of stimulus conditions. The generic model responses (dashed blue lines) capture the qualitative characteristics of the measured responses.
It is possible to identify the parts of the model responsible for various aspects of the response shapes. The response size as a function of contrast and background intensity is mainly determined by the model components up to the generation of the photocurrent, Ios. The response sagging during the step responses at 100 td, and the response rebounds after pulses and steps, are mainly due to the properties of the model components representing the inner segment. The high-frequency oscillations are due to the cone-horizontal cell feedback loop.
At 100 td these oscillations are less prominent at high-contrast steps than at low-contrast steps, which points to the existence of a nonlinearity in the cone-horizontal cell feedback loop. This was modeled in Figure 5B. Figure 8 shows the effect of the absence of this nonlinearity (as in the model of Figure 5A). The effect of the nonlinearity can be understood as follows. During a high-contrast step, Vs becomes strongly negative, and thus brings the transmitter release, Equation 21, into a part of the curve with decreased slope. This decreases the small-signal gain, and this decreased gain in the feedback loop leads to a less steep rise of the response and less prominent oscillations. The fact that the oscillations in the model response are not as strongly reduced as in the measured response suggests that there are additional nonlinearities present, possibly due to voltage-sensitive channels in the horizontal cell membrane active at large hyperpolarizations.
I found that the best fits to the stimuli here and below were obtained with a low value of the time constant of the calcium feedback loop, with τC typically 3 ms. Forcing τC to be much larger worsened the fits considerably, and led to strongly biphasic cone photocurrents and membrane voltages in response to pulses and steps. This biphasic behavior is not consistent with the horizontal cell measurements considered here, which show only a mild rebound (Figure 7), with dynamics differing from those predicted from a slow calcium feedback. In rods, the photocurrent is generally not biphasic, unless the calcium dynamics are manipulated (Torre, Matthews, & Lamb, 1986). Although there are reports in the literature of strongly biphasic photocurrents and membrane voltages in primate cones (Schnapf, Nunn, Meister, & Baylor, 1990; Schneeweis & Schnapf, 1999), these findings may well be a consequence of a disturbed calcium dynamics due to the experimental techniques used. Such a disturbance of the cones is unlikely to have occurred in the horizontal cell measurements considered here, because cones were not directly manipulated, and the preparation left the retina mostly intact (Dacey, 1999; Smith et al., 2001).
Responses to sinusoids
Figure 9 shows responses to sinusoids of various frequencies at contrasts 0.25, 0.5, and 1, all at a 1000-td background level. In particular at high contrasts there are several distortions visible in the experimental data, which are also produced by the model. The compressive/expansive distortion at 0.61 Hz is mainly produced by the static nonlinearity, 1/β. The low-intensity part of the sinusoidal stimulus produces a small β, which is subsequently blown up by 1/β to the high peak in the response. The peak height is limited by the minimum value of β, cβ in Equation 10. The high-intensity parts of the sinusoid produce a large β, which is subsequently compressed by 1/β, which acts then as a compressive nonlinearity. The detailed shape of the distortion at 0.61 Hz is also determined by the calcium feedback loop, which in effect relinearizes the response to some extent: the high peak (low intensity, large 1/β) produces high levels of calcium, reducing the gain of the forward path (divisive gain control in Figure 3). This brings the response considerably closer to the steady-state level (dashed line). On the other hand, the low response (due to high intensity, small 1/β) produces low levels of calcium, increasing the gain of the forward path, also resulting in a response closer to the steady state than would have resulted without the calcium feedback. Because the former effect is stronger than the latter, the distortion is reduced.
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Figure 9. Black circles: data from Figure 6 of Lee et al. (2003), fitted by the model (continuous red lines). Dashed blue lines: generic model. Responses are shown to sinusoids of 0.61, 4.88, 9.76, and 30.3 Hz, of contrast 0.25, 0.5, and 1, at a mean illuminance of 1000 td. Horizontal dashed lines show the steady-state membrane potential. Fitted parameters: τR = 3.46, τE = 9.01, cβ = 3.44·10-3, kβ = 6.44·10-5, τC = 2.41, aC = 9.51·10-2, γ = 0.488, τis = 73.2, and ais = 8.68·10-2; fixed parameter: gt = 150.
For higher frequencies, the distortion due to 1/β gradually disappears, because the first two low-pass filters, τR and τE, reduce the depth of modulation of β and thus 1/β. At 4.88 and 9.76 Hz, another distortion becomes clearly visible: The falling flank of the response becomes steeper than the rising flank. This distortion is mainly due to the low-pass filters in the calcium feedback loop: The maximum reduction due to the control signal 1/α (Figure 6A) is only reached right after the peak in 1/β, which results in a steep falling flank right after that peak.
Finally, a third distortion can be seen at 30.3 Hz, where the rising flank is steeper than the falling flank. This is due to the filtering by the cone-horizontal cell feedback circuit. This circuit has a resonance frequency around 30-40 Hz, with strong phase changes near the resonance peak. This strongly shifts the phase of the distortion products, harmonics at multiples of the fundamental frequency, already produced by the cone. The first harmonic thus gradually shifts phase relative to the fundamental when going through the frequency range surrounding the resonance frequency, which happens to result in a steepening of the rising flank at 30.3 Hz. The distortions described here appear not to be specific to macaque H1 cells, because very similar distortions were measured in cat horizontal cells (Lankheet, van Wezel, & van de Grind, 1991).
It may be noted that some of the remaining deviations between measurements and fits in Figure 9 are related to small vertical offsets between them. Indeed, the fits improve when allowing for small errors, in the order of a mV or less, in the estimates of the steady-state potentials (horizontal dashed lines). Such errors could arise, for example, by small drifts in the intracellularly recorded membrane potential during the experiment.
Sinusoid on sinusoid
In Lee et al. (2003) an experiment was performed to test the speed of the sensitivity regulation. It consists of a high-frequency test sinusoid superimposed on a low-frequency vehicle wave of high modulation depth. The local response to the test modulation then gives a measure of the sensitivity at a particular phase, and therefore illuminance, in the vehicle wave. Figure 10 shows measurements and model responses. As can be seen, the sensitivity regulation is almost instantaneous, with only a small delay mainly due to the low-pass filters in the calcium control loop. The test response can be quantified by extracting the amplitude of the fundamental frequency for each response cycle (Lee et al., 2003). Figure 11 shows for two cells how this response varies as a function of vehicle contrast. Clearly, the responses are well captured by the model.
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Figure 10. Black circles: data from Figure 1B of Lee et al. (2003), fitted by the model (continuous red lines). Dashed blue lines: generic model. A test wave of 19.5 Hz with an amplitude of 127.5 td was superimposed on a vehicle wave of 0.61 Hz and contrast 0.825 at a mean illuminance of 1000 td. Horizontal dashed line: steady-state membrane potential. Fitted parameters: τE=5.10, kβ =1.14·10-4, aC=3.53·10-2, γ =0.729, τis=22.8, and ais=6.68·10-2; fixed parameters: τR=1, cβ =3·10-3, τC=2, and gt=100.
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Figure 11. Black circles: data from Figure 4 of Lee et al. (2003), fitted by the model (continuous red lines). Dashed blue lines: generic model. The data points show the amplitude of the first harmonic of the test wave in an experiment similar to the one in Figure 10, for vehicle contrasts of 0.2, 0.34, 0.6, and 0.85. A and B are from two different H1 cells. Fitted parameters of A: τR=4.66, τE=9.27, kβ=7.83·10-5, aC=1.09·10-1, and ais=3.33·10-2; fixed parameters of A: cβ=3·10-3 τC=4, and g